mripy
- mripy package
- Subpackages
- mripy.io package
- mripy.scripts package
- Submodules
- mripy.scripts.afni_viewer module
- mripy.scripts.extract_physio module
- mripy.scripts.mripy_1dplot module
- mripy.scripts.mripy_run_iglesias18 module
- mripy.scripts.mripy_run_wang15 module
- mripy.scripts.report_parameters module
- mripy.scripts.script_utils module
- mripy.scripts.sort_dicom module
- Module contents
- mripy.tests package
- Submodules
- mripy.afni module
add_colormap()call()check_output()filter_output()generate_spec()get_DELTA()get_DIMENSION()get_ORIENT()get_ORIGIN()get_S2E_mat()get_TR()get_affine()get_affine_nifti()get_attribute()get_brick_labels()get_censor_from_X()get_crop()get_dims()get_head_delta()get_head_dims()get_head_extents()get_hemi()get_nifti_field()get_prefix()get_runs_from_X()get_slice_timing()get_subbrick_selector()get_suma_info()get_suma_spec()get_suma_subj()get_surf_type()get_surf_vol()infer_surf_dset_variants()insert_suffix()parse_patch()patch_afni_proc()set_attribute()set_brick_labels()set_nifti_field()set_slice_timing()split_out_file()substitute_hemi()update_afnirc()write_colorscale_file()xyz2ijk()
- mripy.dcm module
- mripy.decoding module
- mripy.dicom module
- mripy.dicom_report module
- mripy.encoding module
- mripy.evaluation module
- mripy.math module
- mripy.paraproc module
- mripy.preprocess module
ANTsTransformTransformafni2ants_affine()afni2ants_warp()align_S2E()align_anat()align_anat2epi()align_ants()align_center()align_epi()all_finished()ants2afni_affine()ants2afni_warp()apply_ants()apply_transforms()assign_mp2rage_labels()average_anat()blip_unwarp()calculate_min_patch()clusterize()collect_perblock_stats()combine_affine_transforms()combine_censors()copy_S2E_mat()copy_dset()correct_bias_field()correct_motion()count_outliers()create_brain_mask()create_extent_mask()create_hcp_retinotopic_atlas()create_mp2rage_SNR_mask()create_suma_dir()create_suma_script()create_vessel_mask_BOLD()create_vessel_mask_EPI()create_vessel_mask_PDGRE()deoblique()detrend()find_best_reverse()find_epi_dark_voxel_threshold()fs_recon()glm()irregular_resample()is_affine_transform()manual_transform()nudge_cmd2mat()parse_seq_info()prep_mp2rage()prep_mp2rages()resample()resample_to_surface()retrieve_mp2rage_labels()scale()skullstrip()unifize_epi()zscore()
- mripy.six module
Module_six_moves_urllibModule_six_moves_urllib_errorModule_six_moves_urllib_parseModule_six_moves_urllib_parse.ParseResultModule_six_moves_urllib_parse.SplitResultModule_six_moves_urllib_parse.parse_qsModule_six_moves_urllib_parse.parse_qslModule_six_moves_urllib_parse.quoteModule_six_moves_urllib_parse.quote_plusModule_six_moves_urllib_parse.splitqueryModule_six_moves_urllib_parse.splittagModule_six_moves_urllib_parse.splituserModule_six_moves_urllib_parse.splitvalueModule_six_moves_urllib_parse.unquoteModule_six_moves_urllib_parse.unquote_plusModule_six_moves_urllib_parse.unquote_to_bytesModule_six_moves_urllib_parse.urldefragModule_six_moves_urllib_parse.urlencodeModule_six_moves_urllib_parse.urljoinModule_six_moves_urllib_parse.urlparseModule_six_moves_urllib_parse.urlsplitModule_six_moves_urllib_parse.urlunparseModule_six_moves_urllib_parse.urlunsplitModule_six_moves_urllib_parse.uses_fragmentModule_six_moves_urllib_parse.uses_netlocModule_six_moves_urllib_parse.uses_paramsModule_six_moves_urllib_parse.uses_queryModule_six_moves_urllib_parse.uses_relative
Module_six_moves_urllib_requestModule_six_moves_urllib_request.AbstractBasicAuthHandlerModule_six_moves_urllib_request.AbstractDigestAuthHandlerModule_six_moves_urllib_request.BaseHandlerModule_six_moves_urllib_request.CacheFTPHandlerModule_six_moves_urllib_request.FTPHandlerModule_six_moves_urllib_request.FancyURLopenerModule_six_moves_urllib_request.FileHandlerModule_six_moves_urllib_request.HTTPBasicAuthHandlerModule_six_moves_urllib_request.HTTPCookieProcessorModule_six_moves_urllib_request.HTTPDefaultErrorHandlerModule_six_moves_urllib_request.HTTPDigestAuthHandlerModule_six_moves_urllib_request.HTTPErrorProcessorModule_six_moves_urllib_request.HTTPHandlerModule_six_moves_urllib_request.HTTPPasswordMgrModule_six_moves_urllib_request.HTTPPasswordMgrWithDefaultRealmModule_six_moves_urllib_request.HTTPRedirectHandlerModule_six_moves_urllib_request.HTTPSHandlerModule_six_moves_urllib_request.OpenerDirectorModule_six_moves_urllib_request.ProxyBasicAuthHandlerModule_six_moves_urllib_request.ProxyDigestAuthHandlerModule_six_moves_urllib_request.ProxyHandlerModule_six_moves_urllib_request.RequestModule_six_moves_urllib_request.URLopenerModule_six_moves_urllib_request.UnknownHandlerModule_six_moves_urllib_request.build_openerModule_six_moves_urllib_request.getproxiesModule_six_moves_urllib_request.install_openerModule_six_moves_urllib_request.pathname2urlModule_six_moves_urllib_request.proxy_bypassModule_six_moves_urllib_request.url2pathnameModule_six_moves_urllib_request.urlcleanupModule_six_moves_urllib_request.urlopenModule_six_moves_urllib_request.urlretrieve
Module_six_moves_urllib_responseModule_six_moves_urllib_robotparserMovedAttributeMovedModuleadd_metaclass()add_move()assertCountEqual()assertRaisesRegex()assertRegex()b()create_unbound_method()get_unbound_function()int2byte()iteritems()iterkeys()iterlists()itervalues()python_2_unicode_compatible()raise_from()remove_move()reraise()u()with_metaclass()
- mripy.surface module
- mripy.timecourse module
AttributesEpochsEpochs.add_event_attr()Epochs.add_feature_attr()Epochs.aggregate()Epochs.apply_baseline()Epochs.average()Epochs.copy()Epochs.drop_events()Epochs.from_array()Epochs.from_dict()Epochs.n_eventsEpochs.n_featuresEpochs.n_timesEpochs.pick()Epochs.plot()Epochs.shapeEpochs.summary()Epochs.to_dict()Epochs.transform()
EvokedRawRawCacheconcatinate_epochs()convolve_HRF()create_ERP()create_base_corr_func()create_ideal()create_times()cut()cutter()events_from_dataframe()events_to_dataframe()first_peak()get_HRF()group_epochs()qcut()qcutter()read_events()wcut()wcutter()
- mripy.utils module
- mripy.vis module
- Module contents
- Subpackages